Digital Scholarship Center Receives Grant to Develop Text Mining and Summarization Methods to Aid in COVID-19 Research

The Digital Scholarship Center’s James Lee, PhD, and Danny Wu, PhD, MSI, Department of Biomedical Informatics, are one of 11 recipients of the College of Medicine’s Special Coronavirus (COVID-19) Research Pilot Grant Program. An opportunity open to all UC colleges in the Academic Health Center, the program was established to rapidly support the development of innovative studies that will contribute significantly to knowledge of COVID-19 in hopes to have significant impact on treatment, diagnosis and management of the infection or its prevention. With financial support from the UC Office of Research directed by Dr. Pat Limbach, and the College of Medicine Office of Research, the Special Coronavirus (COVID-19) Research Pilot Grant Program awarded a total of $425,000 to recipients.

The Digital Scholarship Center’s proposal, “Using Intelligent Text Mining and Summarization Methods to Address COVID-19 Open Research Dataset Challenge,” received a grant totaling $25,000 to develop a text mining pipeline and web-based intelligent query system to extract and summarize relevant COVID-19 related literature. The long-term research objective of the project is to create a usable and generalizable information resource to search scientific literature and generate knowledge through human-centered AI approaches.

“We anticipate the project to have important impacts within our research group, the university and the research community as a whole,” said James Lee, associate vice provost for digital scholarship, associate dean of libraries and director of the Digital Scholarship Center. “In building the intelligent query system, a broader impact will be made in the greater research community as we will develop a tool that can take any Coronavirus related question and summarize the literature.”

The intelligent query system will be evaluated on its usability and released to all researchers at the university as a self-service tool to support their COVID-19 research projects. Therefore, the system will likely have a great impact on the research productivity at the university, especially when many COVID-19 related grants have been or will be released in the next few months. “We anticipate that the intelligent query system could be a valuable tool to help understand and defeat this novel Coronavirus,” said Lee.

The Digital Scholarship Center is a catalyst for collaborative, trans-disciplinary forms of research and teaching, bringing together humanistic methods with technical innovations. For more information, visit their website https://dsc.uc.edu/.