Research Labs @ GMP Library News update – Zhiyuan Yao Attends the AAG-UIUC Summer School

Zhiyuan Yao is one of two GIS support students working in the Research & Data Service research labs at the Geology Math and Physics Library.  The Data & GIS collab is open to students, staff and faculty seeking help with their geospatial data needs, and the Visualization lab is open for data visualization consultations and collaborative work.  Email us at ASKData@ucmail.uc.edu for more information.  

Great learning and collaboration experience in AAG-UIUC Summer School

This summer in July, I was honored to be offered the opportunity to attend AAG-UIUC 2019 Summer School, which focused on Reproducible Problem Solving with Cyber GIS and Geospatial Data Science. During the one-week summer camp, I met many scholars, got access to the supercomputer Virtual Roger through CyberGIS-Jupter, learned the cutting-edge advances regarding geospatial data science, and got a deeper understanding about reproducibility and replicability. I absolutely had a wonderful time there, and this experience provoked me to think more about how we could develop novel solutions to complex problems.

 

Participants in the AAG-UIUC summer school with mentor Diana Sinton (Ex Director of UCGIS in the  green shirt) in the middle.

Continue reading Research Labs @ GMP Library News update – Zhiyuan Yao Attends the AAG-UIUC Summer School

Announcing the Redesigned UC Libraries Website

redesigned libraries homepage

Check out the redesigned Libraries website scheduled to launch Thursday, Aug. 15.

Some of the new features and upgrades of the UC Libraries website redesign include:

  • updated look and feel and an uncluttered homepage
  • refreshed, user-centric content under the categories of: “Find, Request, Borrow,” “Special Collections,” “Research and Teaching Support,” “Spaces and Technology,” “About” and “My Accounts”
  • tabbed search box located prominently front and center at the top of the homepage, allowing users to search for articles, books, journals and databases much more quickly and easily
  • ability to search Research Guides by subject via the homepage
  • call-outs for Special Collections, Digital Technologies & Innovation and Library as Place
  • library news and links to information such as the Strategic Plan, Progress Report, Staff Directory and more.

Included in the redesign are all college and departmental (C&D) library web pages from the Archives to Rare Books Library to the Henry R. Winkler Center for the History of the Health Professions, as well as the Clermont College Library and UC Blue Ash College Library web pages.

While the starting web address of the site remains the same – www.libraries.uc.edu, the navigation and content within the site has changed, so update any links or bookmarks you may have to the site. And while great care was taken to be accurate, if broken links or missing content are discovered, contact Team Dynamix.

NIH Data and Open Science Expert to Present Lecture and Workshop on September 17, 2019

Image of Dr. Lisa Federer
Dr. Lisa Federer, PhD, MLIS

Join UC Libraries and IT@UC for a lecture on the reuse of biomedical research data and a workshop on data visualization in R.

On September 17th, Dr. Lisa Federer, Data and Open Science Librarian for the National Library of Medicine, will visit UC as part of our Data and Computational Science Series (DCS2).

The DCS2 planning committee cordially invites you to attend Dr. Federer’s lecture, luncheon and workshop.

Lecture and Luncheon:

If You Share It, Will They Come? Quantifying and Characterizing Reuse of Biomedical Research Data
Tuesday, September 17, 2019 11:00 AM to 1:00 PM
Henry R. Winkler Center for the History of the Health Professions, Stanley J. Lucas, MD Board Room.

Workshop:

Endless Forms Most Beautiful: Creating Customized Data Visualization with ggplot2 in R
Tuesday, September 17, 2019 1:30 PM to 3:30 PM
Donald C. Harrison Health Sciences Library, Dr. Stanley B. Troup Learning Space.

These events are free and open to all. Registration is required.

Register for the Lecture and LuncheonRegister for the Workshop.

Please be sure to log into the Faculty Development OneStop website to complete your registration.

Registration also permitted via phone and email | (513) 558-0725 | Don.Jason@uc.edu

These events are funded through a universal provider grant awarded by the Provost Office.

Read Source to learn more about the news, events, people and happenings in UC Libraries.

source graphicRead Source, the online newsletter, to learn more about the news, events, people and happenings in UC Libraries.

In this issue of Source, Dean Xuemao Wang writes about the invaluable support of library donors, volunteers and faithful advocates that make events such as the inaugural Adopt-A-Book event, held this past March, a success. We celebrate the latest three publications from the University of Cincinnati Press and the graduation of the second cohort of 56 students from the Joint Co-Op Institute.

Students feature in three articles – one about a pilot program that integrates new technology into the Critical Care Nurse Residency Program (CCNRP) curriculum, a second from a former graduate assistant discussing her experience working in the Digital Scholarship Center, and the third where a student assistant in the Archives and Rare Books Library writes about The Irish Fairy Book.

Lastly, we highlight the mixed materials collection available in the College of Education, Criminal Justice and Human Services (CECH) Library.

Read these articles, as well as past issues, on the web at http://libapps.libraries.uc.edu/source/ and via e-mail. To receive Source via e-mail, contact melissa.norris@uc.edu to be added to the mailing list.

XSEDE High Performance Computing (HPC) Boot Camp

Posted on behalf of Amy Latessa,  Research Coordinator for IT@UC Research & Development

The Data & Computational Science Series presents:
XSEDE High Performance Computing (HPC) Boot Camp

Free Registration (required)

Description: This 4-day event will include MPI, OpenMP, OpenACC and accelerators. This event will be presented using the Wide Area Classroom(WAC) training platform and will conclude with a special hybrid exercise contest that will challenge the students to apply their skills over the following 3 weeks and be awarded the Fifth Annual XSEDE Summer Boot Camp Championship Trophy.  In addition, an XSEDE Badge will be available to those who complete the Challenge.

Tentative Agenda

When: June 3-6, 2019

Location: Langsam Library room 462

2911 Woodside Drive
Cincinnati, OH 45221

 

Note: You need an XSEDE account to register Create Account

Parking: Woodside Avenue Garage

Special Instructions: Participants should bring their own laptop, lunch will be provided.

Questions? Contact Amy Latessa 

XSEDE (eXtreme Science and Engineering Discovery Environment) is a virtual system that provides compute resources for scientists and researchers from all over the country. Its mission is to facilitate research collaboration among institutions, enhance research productivity, provide remote data transfer, and enable remote instrumentation. XSEDE is funded by National Science Foundation (NSF).  Getting Started Guide for XSEDE.

 

 

News from the RDS Research Labs @ GMP

As we begin the UC Maymester session, we are excited to share news about our students working in the Research and Data Services Research Labs @ the Geology Math and Physics Library.

We say farewell to one of our students working in the labs.  Sobiya George will return to the Chemistry Department for the summer and continue her research projects in Dr. Anna Gudmundsdottir’s lab.  We appreciate Sobiya’s hard work on the ImageJ and Zotero workshops, and wish her luck on her research.

Zhiyuan Yao, Sobiya George, and Jenny Latessa

And we offer many congratulations to Zhiyuan Yao on her acceptance to the AAG-UCGIS Summer School 2019.   Through this NSF supported program, Zhiyuan will be working with “30 graduate students and early career scholars to learn and collaborate in developing novel solutions to complex problems and to take advantage of geospatial data science and cutting-edge scientific advances and technical capabilities of cyberGIS (e.g., CyberGIS-Jupyter and Virtual ROGER: cybergis.illinois.edu/infrastructures). Participants will experience the types of collaborative and professional interactions that are key to addressing reproducible geospatial problem solving in the context of computation- and/or data-intensive research involving confidential geospatial data.”  This is an amazing opportunity for Zhiyuan to grow her skills and meet other researchers in the GIS field.  To learn more about this program, visit their website.  Good luck and enjoy the program.

Zhiyuan Yao in the Data & GIS Collab
Zhiyuan Yao

The lab will be open for consultations and workshops over the summer.  Check the Research Labs website  for the latest information on hours and any closures due to vacations.  Please note that many changes are coming to the libraries website as part of the greater UC website refresh.  For now, one easy way to find the Research Labs website is to visit the library libguide page and type in GIS.  The parent RDS website can now be found under the Research tab on the main Libraries.uc.edu website.  Email AskData@UC.edu if you have any questions.

Reflections of UC Data Day 2019 –

Article Written by Rebecca Olson – Social Science and Business Informationist.

On April 1, 2019, UC Libraries hosted the 4th annual Data Day Conference. A celebration of research being held on campus, in the local area, and on the national and international level, this year’s focus was on Diversity, Equity, and Inclusion in data.

The first keynote speaker, Amanda J. Wilson, detailed the All of Us program the National Library of Medicine and National institute of Health have funded and promoted. Individuals are allowed to take charge of their health by participating in and directing research. Parts of the program include providing access to resources at libraries, community centers, and laundromats to reach the broadest population.

Continue reading Reflections of UC Data Day 2019 –

Workshop on Research Reproducibility and Data Visualization using R.

Join UCLibraries and IT@UC for a workshop on Research Reproducibility and Data Visualization using R (part of the Data and Computational Science Series (funded by the Provost Office through a universal provider grant).

 

On April 16th, Dr. Mine Cetinkaya-Rundel, Associate Professor at Duke University and Data Scientist & Professional Educator at RStudio will be on campus to give a presentation about Reproducible Research and conduct a workshop on Data Visualization in R.

The day’s schedule is below.  The venue will be the Data Visualization Space in the Geology-Math-Physics Library – 240H Braunstein Hall.

10:00 am to 11:00 am  Presentation – Reproducible Research

11:00 am to 12:00 pm  Meet and Greet with Dr. Cetinkaya-Rundel  (Lunch provided)

12:00 pm to 2:00 pm  Workshop – Data Visualization in R with ggplot2 and gganimate

 

These events are free and open to all.

Visit the Faculty One Stop website to register.

More information about the DCSS 2019 series can be found on the DCSS website .

Flyer: DCS2 Word flyer_Rstudio

Workshop on Text mining HathiTrust Resources with python

 

 

 

 

 

Eleanor Dickson Koehl, digital scholarship librarian with the HathiTrust will visit UC Libraries to give a presentation on the HathiTrust Research Center and conduct a workshop on text mining using HathiTrust Resources and python.  The talk will be Tuesday Feb 26th from 3- 4 pm and the workshop will be Wednesday Morning from 9am -12pm with a luncheon afterwards from 12 pm-1 pm.  Please join for one or both events which will be held in the Vis Lab 240H Braunstein Hall – inside the Geology-Math and Physics Library.  These events are free and open to all.  We request that attendees of the text mining workshop complete registration through the faculty one stop system.

For more information please refer to the DCS2 Word flyer_hathi_2019.

Data Day 2019: Diversity, Equity and Inclusion in Data

You are cordially invited to the University of Cincinnati’s 4th Annual Data Day sponsored by The University of Cincinnati Libraries and IT@UC.

Diversity, Equity and Inclusion are topics gaining national attention.  Our 4th Annual University of Cincinnati Data Day will explore these topics in depth and highlight how researchers can expand their understanding by considering the impact of diversity, equity and inclusion on their own research.

 What: University of Cincinnati 4th Annual Data Day

 When: Monday, April 1, 2019 9am – 4:30pm

 Where: Tangeman University Center, Great Hall (located on the main campus of the University of Cincinnati)

The day will be comprised of panel discussions, an interactive session where participants will learn R programming skills, and keynote speakers to start and end the day.  The first keynote speaker, Amanda Wilson, will highlight the historic All of Us Research Program that is gathering data from one million individuals to assist in delivering precision medicine by taking into account individual differences in lifestyle, environment, and biology among participants. The second keynote speaker, Deborah Duran, will address how diversity and inclusion are necessary considerations as we consider our research and how doing so can have an impact on us all. Panelists will discuss health disparities and health equity research from local and statewide perspectives as well as how data is being used to empower social justice.

Don’t miss this exciting day!

For more information and registration visit: http://libapps.libraries.uc.edu/blogs/dataday/.